U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX385613: GSM1277180: RNASeq_riboM_contDevA_N2_28hr; Caenorhabditis elegans; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 45.3M spots, 2.3G bases, 1.4Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Developmental Timecourses total-RNA sequencing [Ribosome repleted total RNA]
show Abstracthide Abstract
We report the presence of extensive, transcriptionally controlled oscillations in the C. elegans, developmental transcriptome. Furthermore, using ribosome profiling, we show that these oscillating transcripts are actively translated. Overall design: Examination of two timecourses that were collected over C. elegans development and analyzed by RNA-seq of "RiboMinus" libraries
Sample: RNASeq_riboM_contDevA_N2_28hr
SAMN02428704 • SRS509719 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: total RNA isolation was performed using Tri-Reagent (MRC) Library preparation was performed using the ScriptSeq v2 RNA-Seq library preparation kit (Epicentre) according to the manufacturer's protocol
Experiment attributes:
GEO Accession: GSM1277180
Links:
External link:
Runs: 1 run, 45.3M spots, 2.3G bases, 1.4Gb
Run# of Spots# of BasesSizePublished
SRR104123045,324,0442.3G1.4Gb2014-03-03

ID:
553465

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...